Boot Sector
When your installing a dual boot, its best to try and get the linux /boot partition or all the boot info installed as close to the beginning of the first sector of the hard drive as possible. And try not to use FAT32, if you are, use FAT16. I found it best to first load windows on a FAT16 partition, then load Linux with all the partitions available taht you want for it....then after everything is working okay with the dual, you can then go back and create your partitions for Windows.
Hope this helps,
Drew
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